Sentence examples for by scanning the sequence from inspiring English sources

Regions with local profile periodicity (local profility) can be revealed by scanning the sequence with a small window.

Since the TF binding site region is composed of specific sequences, and only by scanning the sequence region using PWM, we get the network edges.

The metaMicrobesOnline analysis pipeline starts with contig assembly, gene calling, and translation into protein sequences, followed by scanning the sequence against recognized gene and protein domain families [31].

In order to increase the overall speed of the process, Tagenerator starts by scanning the sequence of interest for occurrences of all the 5' ends and the 3' ends.

Functional patterns in the hinge region, swapped region and full sequence were identified by scanning the sequence of protein structure involved in swapping using ScanProsite (80) with PROSITE (81) data downloaded on November 2010.

Putative protein domains were predicted by scanning the sequences against PROSITE and Pfam databases (www.expasy.org and www-ludwig.unil.ch/SEREX).

He found two enzymes by standard methods and two by scanning the DNA sequence when that became available.

We used the PTP domain of human proteins which was identified by scanning the peptide sequence on ExPASy Prosite (http://www.expasy.org/prosite/).org/prosite/

In order to characterise new bacteriocins produced by Streptococcus mutans we perform a complete bioinformatic analyses by scanning the genome sequence of strains UA159 and NN2025.

Since TEs have not been previously identified in S. japonicum, we conducted TE prediction by scanning the genome sequence using REPET software.

TFBS enrichment analysis was conducted by scanning the promoter sequence of the genes in the analyzed modules for enrichment of known transcription factor binding motifs using the Clover algorithm [ 52].