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A search model from a previous S100B structure [Protein Data Bank (PDB) entry 1MHO(47, 47)] was generated by removing coordinates for ligands and water.
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The initial model of the apo form of R1α(113–376) was prepared by removing the coordinates of cAMP from the coordinate file.
Finally, let us define as the vector of such that the coordinates in are zeros and the vector obtained by removing these coordinates is precisely.
Given ({mathcal C}'), one can obtain a code ({mathcal C}^{prime prime }) with (|{mathcal C}^{prime prime }| = |{mathcal C}'|) by removing fixed coordinates from all the codeword in ({mathcal C}').
The crystal structures were refined by removing water molecules and repeating coordinates.
The coordinates were then processed by removing all records pertaining to molecules comprised of less than 10 atoms (including solvent atoms and monoatomic ions), and for the sake of charge treatment generality, organometallic complexes were stripped of their metallic cores.
To implement a 2x2 spatial averager, first we needed to change the addressing of the pixels by removing the least significant bit of the X and Y coordinates.
By removing a lot of information without chemical relevance, such as Cartesian coordinates, it is possible to manipulate and search the rest very quickly, using simple unix commands.
Let be the coordinates that must not be changed, let be the matrix obtained from by removing the corresponding columns; this matrix defines the shortened code.
TMAs are produced by removing cylindrical cores of tissue from up to donor paraffin blocks and embedding these into a single recipient paraffin block at set array coordinates.
The number of possible target sites for human miR-1302 in all human coding genes was calculated after removing the coordinates of overlapping genes.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com