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For comparative purposes, the model predictions were also applied to a 'shuffled' structure, produced by random permutation of the same radii of the mapped structure as well as an 'optimally sparsed' structure.
It should be noted that we only concern the 5-DoF limbs here, because the 6-DoF ones can be easily obtained by random permutation of the joints in P3R a R b R c P1P2.
This was created by random permutation of each predictor separately within the data set, re-calculating wpi, and repeating this procedure 100 times for each predictor.
The cutoff level was determined by random permutation of the time points of all [Ca2+]i peaks of each cell 2000 times with a time resolution of 5 sec.
Then, 105 samples were generated by random permutation of the PS values for this cluster set.
Then 100,000 trees were generated by random permutation of apical branches.
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Null distribution of the relative difference of each gene is generated by random permutations of patients' prognostic group labels.
Statistical significance was estimated by random permutations of the subset labels [Additional file 2].
For this analysis, PCA was performed over 1000 matrices generated by random permutations of residual data.
Significance was assessed by random permutations of the genotypes between progenitors.
CMP were generated by random permutations of different numbers of taxa and branch lengths from a random additive distance matrix.
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by random amplification of
by random ligation of
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by random motion of
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by successive permutation of
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