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In these cases the OntoSearch logic works differently by querying for multiple concept matches.
Then, by querying for PDBe source information from UniChem, the user may obtain the base-URL for compounds in PDBe ('http://www.ebi.ac.uk/pdbe-srv/pdbechem/chemicalCompound/show/').
This was confirmed in PathVisio statistical analysis by querying for number of genes (data not shown) showing 2-fold expression change.
To meet the users' privacy requirements for DHT lookups, we use a range query approach [53]: Alice will not request a specific entry using its key, but instead a set of results by querying for a prefix that refers to a certain subtree within the DHT (cf. Figure 5).
In order to create the multiple alignment, we first retrieved 108 human TK gene records from EntrezGene by querying for domain cd00192 [26].
Meta-analysis was performed using the Nextbio database of curated and processed high-throughput data (http://www.nextbio.com) by querying for the search term "ING2" and filtering for "male infertility" or "azoospermia".
Similar(45)
It is initially designed using a small set of labeled points, and subsequently refined by actively querying for the labels of pixels from a pool of unlabeled data.
However, by repetitively querying for a large number of topics and websites, users disclose a large amount of personal data to these search engines.
For example, by querying ParkDB for gene symbols, we found that α-synuclein (SNCA) is differentially expressed and down-regulated in the entire set of human experiments comparing substantia nigra from Parkinson's patients against normal controls.
This data set was developed by querying MEDLINE for the medical subject heading (MeSH) Mutation and selecting citations relevant for prostate cancer based on MetaMap annotation.
CTD content has been primarily based upon articles triaged by querying PubMed for both a chemical-of-interest and a gene concept to bias for articles describing chemical gene interactions.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com