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This work clearly demonstrates a much larger transcriptome of E. coli than indicated by present annotations.
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Likewise, BioDEAL can present annotations generated by external projects such as BioCreAtIvE [ 9, 18], whose overarching goal is to enhance abstracts with annotations.
This work does not present annotations but a KDM extension.
This notion is supported by several recent studies on different organisms that report more transcription than the present annotation suggests [9], [10], [19].
In this article we study the effects of offering feedback to annotations, namely by presenting word graphs that contain the architect's annotations and semantic associations based on these words.
Structural genomics can augment the use of sequence homology for functional annotation by presenting opportunities to identify structural homologues even where sequence homology may be too low to identify suitable homologues.
Section "Results and discussion" line 86 – Probably it would be better to write simply "by considering the annotations present in XXX" or "by using the software XXX" and "(see Methods for details)".
In this article, we address this shortfall by presenting a method of putative metabolite annotation (MetAssign) that provides probabilistic annotations of individual peaks, as well as a probabilistic estimate of the presence/absence of particular metabolites based on the integration of information from multiple peaks (including isotopes and adducts).
"Genius breaks down text with line-by-line annotations, added and edited by anyone in the world.
Nonetheless, as shown by the present study, GO annotation did provide a multitude of biological processes potentially involved in the chicken response to Cp infection and NE development, and identified fewer processes that are solely affected by feeding the birds a Medicated diet (bacitracin) compared to the Non-medicated.
The authors evaluate their method by presenting missed and false detections and by comparing the schooling behaviour as identified by manual annotation and automated annotation.
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