Sentence examples for by predicting gene expression from inspiring English sources

Similarly to previous studies (Cheng et al., 2012; Dong et al., 2012; Setty et al., 2012), the models were optimized by predicting gene expression based on putative regulators (TFs) and their predicted impact.

The challenge for predicting gene expression provided by the DREAM project is of great importance to explore the benefits and bottlenecks of the state-of-the-art algorithms in a fair competition.

> -wrap-foot> Gene: Top scoring genes ranked by the predictive power of methylation to predict gene expression variation.

Also, many transcription factors especially those with short, frequently occurring binding sites are not by themselves sufficient to predict gene expression.

This model was validated by assessing its ability to predict gene expression under novel conditions.

Wu et al. 14 similarly proposed a network-analysis-based model that utilized gene expression profiles, following individual treatments, to predict gene expression changes induced by drug combinations, which were then used to estimate the effectiveness of the combinations.

The decision-tree based approaches by [16], [17] and [18] go a step further and predict gene expression from motif presence and transcription factor expression.

Therefore, attempting to predict gene expression data from ChIP-chip data, or even to predict gene expression data generated by one lab from expression data generated by a different lab, may turn out to be difficult.

The kinetic model predicts gene expression patterns.

Finally, we show that CADBIOM modeling allows for the identification of complex trajectories induced by multiple extracellular stimuli, successfully predicting gene co-expression patterns and biological functions that cannot be characterized by direct experimental approaches.

The average accuracy of the networks predicted by gene expression data alone, i.e. by using an uninformative prior, corresponds with the leftmost points in the graph.