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To be conservative, we declared a codon to be targeted by positive selection when the cumulative posterior probability of γ ≥ 1 was greater than 0.75, as suggested (Quach et al. 2013).
To be conservative, we declared a codon to be targeted by positive selection when the cumulative posterior probability of γ ≥ 1 was > 0.75, as suggested (Quach et al. 2013).
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By studying the change in earnings after career changes, I find the evidence of positive selection when teachers move into the non-teaching sectors and of negative selection when non-teachers move into the teaching sector, which results in the decrease in the average teacher quality.
A site was considered potentially under positive selection when it had probabilities above 0.95.
This is evident in Figure 4a, where the power of iHS is 0.74 when selective sweeps are very rare, 0.69 when 1% of the genome is influenced by positive selection, and drops to 0.33 when just 5% of the genome influenced by selection.
Rather, the interpandemic evolution of influenza appears to consist of extended intervals of stasis, which are characterized by neutral sequence evolution, punctuated by shorter intervals of rapid fitness increase when evolutionary change is driven by positive selection.
The algorithm we present for simulating genealogies influenced by positive selection will allow for more thorough exploration of complex demographic scenarios when evaluating methods for detecting positive selection.
Genes that have been changed by positive selection have significantly more protein-altering mutations.
We infer that this young haplotype has been driven to a high frequency by positive selection.
After washing, CD11c+ cells were purified by positive selection using MACS separation columns (Miltenyi).
The majority are clade-specific, with the wood clade having the largest number of gene ontologies impacted by positive selection.
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