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The complex three dimensional flow structures are revealed by plotting the results in different planes.
Some of the difficulty, however, can be illustrated by plotting the results from the Bcd/Hb experiments of Ref [32] in the form which has become conventional in the study of gene expression noise, as a fractional variance vs mean expression level (Fig. 5).
We further examined the correlations between genetic distance of parental plant individuals and their F1 hybrid fertility by plotting the results of the artificial cross experiments with parental nuclear or chloroplast genetic distances of the crossed lines.
Abundance determined for all proteins observed in our analyses was reproducible when using the modified emPAI equation with the approximated constants, as shown by plotting the results from two independent experiments against one another.
It also suggests comparing case-control study results with those of cohort studies by plotting the results vs. follow-up interval; if the data from both types of studies can be modeled with a linear or second-order regression fit without large deviations, the case-control results should be afforded more credibility.
The relative contributions of BA and H to CR were investigated by partitioning CR into the response in BA and H for each of the 20 generations, and the differences between models were shown by plotting the results of selection on GEBV from one model against those of another model.
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CN combinations which were rare, or which formed clusters too diffuse to be called by the clustering algorithm, were called by two researchers blinded to cohort following further discrimination by plotting the FCGR3B/FCGR3A result against the FCGR3(A+B)/Chresultsult.
We evaluated gene-finding methods in terms of how successfully they identify true CDSs with few false positives, and summarized the results by plotting the partial receiver operating characteristic (partial ROC) curves by using various cutoff values.
We evaluate various association methods in terms of how successfully they identify the true causal SNPs with few false positives, and summarize the results by plotting the partial receiver operating characteristic (partial ROC) curves and reporting the partial areas under the curves (PAUC).
Figure 1 shows the differences between the 1- and 2-state models by simulating them and plotting the resulting conformations.
We directly compared these qPCR results with the RNA-seq results by plotting the linear regression of the log2FoldChange(Old/Young) values for each transcript (Additional file 7: Figure S1A).
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