Sentence examples similar to by nucleotide composition analysis from inspiring English sources

Each macro-haplogroup-specific multi-alignment was then subjected to nucleotide composition analysis by applying the SiteVar algorithm (Pesole and Saccone 2001) to determine the allele occurring most frequently in each position thus generating the MHCSs.

This suggests the possible use of nucleotide composition analysis to predict expression patterns of viral genes.

Nucleotide composition analysis was performed essentially by counting A, T, C, G, N, and X using an in-house Perl program.

The result of the MVIM and WECE nucleotide composition analysis also demonstrates that the acquisition of these genes by dinoflagellates and excavates was a relatively ancient event(s).

GC skew and nucleotide composition analysis were performed as described previously [149].

Thirdly, CompostBin nucleotide composition analysis (Materials and Methods) shows that despite significant overlap between the two genetic elements, one can still clearly detect differences between their patterns of nucleotide composition (Figure 2).

To determine the potential impact of nucleotide constraints on codon usage, nucleotide composition analysis was performed.

Nucleotide composition analysis showed that A and U nucleotides constitute the majority of overall nucleotide composition in MARV genomes (Table  1).

The nucleotide composition analysis showed that more than 20% of novel miRNAs start with U, which is statistically the typical property of mature miRNAs [ 59, 60], and the overall nucleotide composition showed higher percentage of A and G.

Nucleotide composition analysis revealed a higher %AT in the repetitive region than the coding region or the overall maxicircle sequence for all trypanosomatid maxicircle sequences (Table 2).

The nucleotide composition analysis revealed a bias at position 1 for 5′ C/G in sense and 5′ C in antisense strand.