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This ssDNA is generated by nucleolytic processing of DSB or arises from perturbed replication.
HR is initiated by nucleolytic processing of the DSB end to generate 3' ssDNA (single-stranded DNA) overhangs.
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Biogenesis of C/D box snoRNAs is a complex process that involves posttranscriptional snoRNP assembly coupled with nucleolytic processing of host gene pre-RNA introns and intranuclear trafficking (Filipowicz and Pogacic 2002).
Thus, Mre11 nuclease activity is required for the nucleolytic processing of the HO-induced telomere in G1 cells lacking Rif2.
Early in homologous recombination, the nucleolytic processing of DNA double-stranded (ds) breaks or single-stranded (ss) gaps formed during replication produces a stretch of ss DNA that is targeted by recombinases and subsequently paired with a homologous duplex to form a DNA joint called a D-loop [2].
Yku-mediated inhibition of Exo1 is relieved in G2, as nucleolytic processing of an HO-induced telomere in G2-arrested rif2Δ cells depends on both Mre11 nuclease activity and Exo1 even when Yku is functional (Figure 3).
Biogenesis of miRNAs involves nucleolytic processing of a precursor transcript with extensive foldback structure [ 21- 23].
Nucleolytic processing of the template DNA strand should stop transcription of the corresponding gene.
MRN/X is also implicated in nucleolytic processing of telomeres to generate G-overhangs [95,96].
Besides snR30, the nucleolytic processing of eukaryotic rRNAs also requires the U3, U8, U14 and U22 box C/D snoRNAs.
Here, we identified BRCA1, CtIP and EXO1 as novel activities required for nucleolytic processing of telomeres lacking TRF2.
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