Sentence examples for by normalizing the probe from inspiring English sources

This effect was minimized by normalizing the probe signals onto the probe signal distribution of the most well-represented GC content.

The expression levels of BAG2 are expressed in terms of a log2 median-centered intensity which is calculated by normalizing the intensity of BAG2 probe to the median of the probe intensities across the entire array.

Relative gene expression of the 31,099 probe sets on the chip was determined by normalizing the raw expression values for each probe set to the DMSO control (= one-fold change for each probe set) from each independent experiment.

Each probing lane was quantified by normalizing the corresponding line graph of pixel intensity versus lane position.

To identify the target hybridized to an array, E-Predict by default normalizes the probe intensities y i to sum to 1: Alternative methods (sum, quadratic and unit vector) may be used to normalize both intensities and free energies.

The specific activity values (TOFs) were calculated by normalizing the methanol oxidation reaction rate by the number of surface active sites probed by methanol chemisorption.

In order to compensate for differences in expression levels between the two genomes represented on the array we analyzed each species separately, by normalizing across probes for each genome.

The distribution of type I and type II probes is forced to be the same by first quantile normalizing the type II probes across samples and then interpolating a reference distribution to which the type I probes are normalized.

The signal values of microarray hybridization were normalized by the probe logarithmic intensity error (PLIER) algorithm.

For the broad analysis of gene function changes [see Additional file 1] the MAS5 signal data replicates were averaged, then data from MOE430A and MOE430B GeneChips was pooled and scaled per sample by normalizing to the trimmed mean for all probe sets in the sample (98%).

One strategy for reducing probe signal scatter among replicate samples involves normalizing the allele-specific fluorescence probe signals from any given sample by the actual amount of total amplification products in that particular sample.