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The data being generated by new sequencing technology extend well beyond human genomic DNA.
This need grows ever more urgent as mountains of data generated by new sequencing technology begin to accumulate, and as we move into the era of personal genome sequencing.
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For more on the PGP, check out a feature I wrote earlier this year on the challenges of interpreting the huge amount of genomic information made possible by new sequencing technologies.
These data are accumulated by new sequencing technologies and enable his group to learn algorithms to predict disease phenotypes, progression and treatment response for individuals.
The 'sequence module' stores EST and mRNA sequences, which are produced by Sanger sequencing and by new sequencing technologies (Solexa, 454, HiSeq2000).
With the huge amount of sequence data that are produced by new sequencing technologies, faster methods for sequence comparison are required.
Sequence repeats severely hamper the assembly of most genomes, and these repeats continue to obscure genome structure even with the high read depths afforded by new sequencing technologies.
The numerous classes of repeats often impede the assembly of genome sequences from the short reads provided by new sequencing technologies.
Nevertheless, detailed, manual curation of genes that have published data would greatly assist in computational-based propagation of function to genes identified by new sequencing technologies.
The higher error rates and shorter contigs characteristic to data generated by new sequencing technologies further underscore the need for automated optical scaffolding tools.
High-resolution genome views provided by new sequencing technologies can be especially informative when applied to progeny clones derived from genetic crosses.
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