Sentence examples for by multilocus sequence analysis from inspiring English sources

Further diversification of species within each of these two evolutionary branches of Leptospira is supported by multilocus sequence analysis and DNA renaturation kinetics [3], [14], [15].

Phylogenetic reconstruction and genetic analysis were performed on a collection of isolates from patients with defined grades of acne, from opportunistic infections, and from healthy carriers by multilocus sequence analysis (MLSA) based on nine housekeeping genes.

Fusarium isolates were compared by multilocus sequence analysis (16 ); species of Bipolaris isolates were identified by examination of the ribosomal internal transcribed spacer region (15 ).

To determine whether the E. albertii like OUT HNM strains were E. albertii, we randomly selected 6 strains and determined their phylogeny by multilocus sequence analysis as described (5 ) (Technical Appendix Table).

Finally, weakly or non-pathogenic (NP) strains, which were originally assigned to the pathovars barbareae or armoraciae, were included into a fourth group of less-defined strains due to their relatedness by multilocus sequence analysis (MLSA) [ 3, 4].

However, genetic variations are known to occur within M. mycoides subsp. mycoides SC as evidenced by restriction fragment length polymorphism [3,4], by IS 1296 and IS 1634 fingerprinting [5 7], and by multilocus sequence analysis [8].

The phylogenetic relationships among completely sequenced Pseudomonas were determined by a multilocus sequence analysis using a concatenated data set of gyrB and rpoD genes.

Phylogenetic relationships of D. zeae EC1 with other Dickeya species were assessed by performing Multilocus Sequence Analysis (MLSA) using four housekeeping genes (atpD, dnaX, gyrB and recA), and the concatenated data set of the four genes was constructed with Pectobacterium atrosepticum SCR1043 as an outgroup.

In contrast, Joseph et al. [ 17] used strains selected by the seven loci multilocus sequence analysis (MLSA; 3036 bp concatenated sequence length) as representatives across the genus and therefore overcame the preconceived grouping of strains based on phenotyping.

Thus, we sought to combine the species identification of a large number of VGS bloodstream isolates, which we typed by using a recently developed multilocus sequence analysis (MLSA) technique (19 ), with patient-specific clinical data to determine relationships between VGS species and clinical endpoints.

However, several subgroups were identified within each species by molecular typing methods such as multilocus sequence analysis (MLSA), multilocus VNTR (Variable Number of Tandem Repeats) analysis (MLVA), or omp2a and omp2b porin genes [ 14- 19].