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The high-throughput SOLiD sequencing approach provides a useful means to estimate the expression profiles of miRNA genes by measuring the sequence reads.
We next studied the evolution of the catalysts by measuring the sequence composition of their 5'-dangling-end (precisely speaking, the frequency of C's minus that of A's).
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Each DRE core in the GSTA5 orthologs was extended by 7 bp on either end and assessed for sequence similarity by measuring the Euclidean distance between sequence pairs.
Meissner (2010) also studies buffer capacity determination problem for restoring the altered sequence for mix-bank type buffer and also compares the resequencing performances of both ASRS and mix-bank buffer by measuring the similarity between FA entrance sequence and scheduled sequence.
By measuring the degree to which sequences of data repeat themselves within a signal, ApEn provides a measure of signal irregularity, related to the rate of production of new information.
It models the structure of a protein sequence by measuring the transition probabilities between pairs of amino acids.
We can precisely determine the overburden stress at a particular depth by measuring the density of the sedimentary sequence (Jaeger and Cook 1979).
We selected six candidate sRNAs and determined their sequence by measuring the approximate length of the transcripts via Northern blot analysis (Figure 2), identifying the sRNA transcriptional start sites via 5' rapid amplification of cDNA ends (5' RACE) [33], and using the transcriptional start site and transcript length data to identify putative transcriptional terminators (Figure 4).
ReadDepth is also an R package to detect CNVs by measuring the depth of coverage in the sequencing data.
Genes undergoing positive selection are identified from sequence data by measuring the ratio of non-synonymous to synonymous substitutions, dN/dS.
The frequency of each phage-Ab in a given population can at this point be inferred by measuring the frequency of its associated tag sequence through standard DNA hybridization methods.
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