Sentence examples for by measuring the read from inspiring English sources

To evaluate read quality, the read length with phred quality ≥ 20 was estimated by measuring the read length after trimming by the qualityTrimmer module of the Euler-SR package [ 33].

By measuring the reads mapped to the non-exonic regions of its corresponding gene but carefully avoid those functional relevant regions, we are able to gain a more reliable estimation of true expression level by eliminating the impact of background noise.

Capped tube was then kept in a water bath at 45°C for 2 h and the difference between the initial readings is calculated by measuring the reading after 2 h.

Capped tube was then kept in a water bath at 45°C for 2 h and the difference in the initial reading was calculated by measuring the reading after 2 h.

Capped tubes were then kept in a water bath at 45°C for 2 h and the difference with the initial reading was calculated by measuring the reading after 2 h.

This is achieved by measuring the background read density in a large bin surrounding the site ('background read density'; default 3000 bp), and then measuring the read density in a smaller focused bin at the same site ('central read density'; default 300 bp).

The high-throughput SOLiD sequencing approach provides a useful means to estimate the expression profiles of miRNA genes by measuring the sequence reads.

Superoxide anions generated by Xanthine/Xanthine Oxidase system were detected with a Chromagen Solution by measuring the absorbance reading at 490 nm using POLARstar Omega Reader.

Quality of the sequences was evaluated by measuring the quality of the reads according to the percentage of bases having a base quality greater or equal than 30 (Q30).

First we examined the ability of read-halves to seed within a genome by measuring the fraction of read-halves aligned in the Bowtie read-half alignment step for various read-half sizes and genome sizes (Figure 2a).

By measuring the number of RNA reads aligned to the top or bottom reference strand for each peak, we could assign each RDIP-seq peak a "strandedness" value, with +1 being all RNA-derived reads aligned to the top strand and −1 all RNA-derived reads aligned to the bottom strand.