Sentence examples for by means of supervised hierarchical clustering from inspiring English sources
Overall similarities in gene expression across all samples were first computed by means of supervised hierarchical clustering using Cluster (uncentered correlation, average linkage) and the corresponding dendogram was generated using TreeView [ 51].
The differentially expressed miRNAs of all three data sets were identified and summarized (Supporting Table 1), and two distinctive expression clusters of miRNAs were obtained by supervised hierarchical clustering analysis in each data set (Fig. 1C-E).
These were analyzed by supervised hierarchical clustering of samples using z-scored normalized data with a Pearson correlation (uncentered) similarity metric and average linkage clustering using CLUSTER and TREEVIEW software [ 45].
Genes that were expressed at significantly different levels between patients and controls were analyzed by supervised hierarchical clustering (uncentered correlation, complete linkage) [25] to visualize the correlation of co-expressed genes in Treeview (available at http://rana.lbl.gov/EisenSoftware.htm).htm
These data were analyzed by supervised hierarchical clustering (Figure 1) and visual inspection indicated that the four subtypes are readily discernible in the Rembrandt dataset.
The dendrogram generated by supervised hierarchical clustering shows a clear separation between fed and fasted conditions.
Differential DNA methylation segregated PPR from PGR by supervised hierarchical clustering and may serve as potential biomarkers for prednisolone response.
The correlations are shown in Fig. 7 grouped by means of a hierarchical clustering approach (see Methods).
We describe the suite Jerarca, designed to efficiently convert networks of interacting units into dendrograms by means of iterative hierarchical clustering.
Similar results were obtained when experimental data were analysed by means of unsupervised hierarchical clustering.
Analysis of the data using a supervised hierarchical clustering method identified a gene expression pattern that was unique and consistent among NPC fibroblasts (Figure 1A).
