Sentence examples for by maximum likelihood tests from inspiring English sources
The data conformed to the proportional hazards assumption, as was established by graphic inspection of survival function versus survival time, and by maximum likelihood tests on time-dependent covariates in each model.
Although Wright and Charlesworth (2004) extended HKA tests by incorporating maximum likelihood tests, the HKA has been rarely used in genome-wide analysis for its constant effective population size assumption (Nei and Kumar, 2000).
Regarding MDL1, the result of the McDonald-Kreitman test is corroborated by the maximum likelihood tests implemented in the PAML and HyPhy analysis.
We used two approaches to infer positive selection during human evolution, the iHS test for recent selective sweeps developed by Voight et al. (2006), and maximum likelihood tests of adaptive protein evolution as deployed in PAML (Yang 2007; Nickel et al. 2008).
Discordance was inferred if any topology was rejected by two or more of the three maximum likelihood tests at a confidence interval of 95% (P ≤ 0.05) and was taken as prima facie evidence of whole-gene lateral transfer.
Phylogenetic reconstruction was performed with MEGA6 (35) by the maximum likelihood test.
We therefore used a codon by codon maximum likelihood test, to ask if we could detect any codons that have been under repeated, strong positive selection.
The window identified as least likely due to chance, is subsequently evaluated by a maximum likelihood test with a test decision based on a Monte-Carlo simulated P-value [ 5].
Both families of models, logistic regression analysis and proportional odds ratios, were fit by using a maximum likelihood test and the partial effect of each variable was assessed by using a likelihood ratio test.
Both models, logistic regression analysis and proportional odds ratio, were fit by using the maximum likelihood test, and the partial effect of each variable was assessed by using the likelihood ratio test.
