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High throughput re-sequencing uncovers various genetic variations by mapping the sequencing reads of related individuals to the reference genome.
FPKM values were obtained by mapping the sequencing reads (from all libraries) to the contigs with the program RNA-Seq by Expectation-Maximization (RSEM) v. 1.2.12 [ 55].
The mA modified regions can be identified by mapping the sequencing reads to the reference sequence of a genome through comparison of read counts between the sample and the control.
We searched for large-scale variations in copy number across the genomes by mapping the sequencing reads of each data set to the wMel genome using BWA (for Illumina data) or Newbler (for 454 data).
Given that we are currently within the era of short-read shotgun sequencing, it should be noted that paralogs may accidentally be collapsed by short-read assemblers if they are very similar, e.g. when creating a genome assembly by mapping the sequencing reads to a closely related reference genome [ 53].
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By mapping the sequence of actions committed by offenders, it is possible to deconstruct the complex crime-commission process in order to identify not only the specific opportunities exploited by offenders but possible strategic intervention points.
Additionally, the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways annotation of unigenes was performed by mapping the sequences obtained from Blast2GO to the contents of KEGG database (Kanehisa and Goto 2000).
To sensitively and extensively examine the plastid RNA editing status of moth orchid, RNA-Seq was used to investigate the editing status of whole-plastid transcripts from leaf and floral tissues by mapping the sequence reads to the corresponding cpDNA template.
To sensitively and extensively examine the plastid RNA editing status of moth orchid, RNA-Seq was used to investigate the editing status of whole-plastid transcripts from leaf and floral tissues by mapping the sequence reads to the corresponding cpDNA in P. aphrodite subsp. formosana.
We did this by mapping the sequence of the probes, and determining their position in the gene with regard to the miRNA target sites predicted for the gene.
The probe sequence accuracy was validated by mapping the sequences to the Ae. tauschii Illumina reads representing 30X genome coverage.
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by mapping the cortex
by mapping the sunniest
by mapping the neocognitron
by mapping the tag
by using the sequencing
by mapping the field
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by mapping the topography
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by mapping the genome
by mapping the brain
by mapping the sequence
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by mapping the mRNA
by mapping the mutation
by mapping the pattern
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