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All of the SH individuals identified by InStruct cluster with indica when all samples are used.
The correction by INSTRUCT did not significantly changed Q values of the PLS and SPLS prediction of TSW.
Our results also indicated that taking into account the structure as revealed by INSTRUCT and even more by DAPC did not improve the efficiency of phenotype prediction.
As a measure of population differentiation we calculated FST using AFLP-SURV1.0 with 100 permutations and assuming the selfing rate estimated from the data by INSTRUCT.
A global estimate of Wright's inbreeding coefficient revealed a high level of inbreeding (FIS = 0.86, P < 0.0001), yielding an elevated population-wide estimate of selfing (SR = 92% when calculated from FIS, and 93.7% when estimated by Instruct).
These populations match well with the major groupings seen on the phylogenetic tree, with the two North American populations identified by InStruct corresponding to the "North America Wild" grouping.
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The electron microscope facility was supported by the Alsace Region, the Fondation pour la Recherche Médicale (FRM), Inserm, CNRS and ARC, by Instruct-ULTRA as part of the European Union's Horizon 2020 (grant ID 731005), the French Infrastructure for Integrated Structural Biology (FRISBI; ANR-10-INSB-05-01) and by Instruct-ERIC.
It is instructed by.
Instructed by Vidya Sykes.
It is instructed by F. Harris.
It is instructed by G. Stiny.
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