Sentence examples for by including the sequence from inspiring English sources

Finally, contigs were concatenated, using a Perl script designed ad hoc, by including the sequence NNNNNCACACACTTAATTAATTAAGTGTGTGNNNNN, which harbors stop codons in all six reading frames [ 11].

Classification of substitutions may be further refined by including the sequence context of each mutated base, either 5′ or 3′ or both.

Furthermore, we expanded the prototype GTRefSet to the extended reference set (ExRefSet, Additional file 1: Table S2) by including the sequences that is highly similar (sequences identity >75%) [ 23] to the representative prototype sequence of the same genotype.

Here, we reanalyze the phylogenetic history of collagen genes by including the sequences from representative members of teleost and tetrapod lineages, thus depicting a clearer picture of evolutionary relationship among members of this family.

Kimura distances were calculated on the basis of complete or partial gene sequences by including the maximum sequence length available from all strains included in the comparison.

Trimmed sequences were further screened by including the vector sequence in the contig assembly using the ContigExpress in Vector NTI Advance™ 10 (Invitrogen Corporation, 2005) and discarding all ESTs that formed a contig with the vector.

Methods, 1st paragraph Supplemental Table 1 could be improved by including the consensus sequence for each motif and the observed sequence in the promoter.

The adjacent genes can then be restored by including the deleted sequence in the knock-in fragment.

By including the FRT sequence in this vector, we reasoned that LV DNA circles generated during vector transduction would serve as substrates for Flp-dependent site-directed insertion of viral DNA into FRT sites engineered into the genome of transduced cells.

By including the newly sequenced P. abies genome in Figure  1 (orange color), we showed that gymnosperm proteins are found in CesA, CslA, CslC, CslD families.

The first one maximised taxonomic representation by including the Aplousobranchia sequences obtained by Yokobori et al. [ 18] which yielded a matrix of 110 taxa (95 Tunicates + 15 outgroups) and 1373 nucleotide sites.