In addition, clusters containing paralogs were limited during orthology inference by implementing a tree-based approach on individual sequence clusters, along with additional pruning steps, to separate paralogs and orthologs (Yang and Smith 2014).
The microsatellite loci among the existing sequences were identified by implementing an algorithm into a program (locusfinder.pl) using Perl.
Concealment was ensured by implementing the allocation sequence to the project team by numbered sealed envelopes who assigned the participants to their groups.
By implementing protein sequence-based representations for both the host and the pathogen, we may obtain a patient-specific genomic model capable of making specific predictions for different host/antigen genotype combinations.
There were also efforts to study selection in chicken by implementing pooled sequencing strategies (Rubin et al. 2010; Qanbari et al. 2011).
The optimal contract can be implemented by a sequence of one-period debt contracts and equity ownership by outsiders.
Target mRNA molecules can be unambiguously identified thanks to the impressive read length of 27 nucleotides obtained by implementing sequencing by oligonucleotide ligation and detection (SOLiD) chemistry in the protocol [ 8].
The composition of bacterial communities is typically studied by implementing clonal Sanger sequencing of 16S rRNA PCR products [ 1- 4].
Figure 3(b) illustrates how a unitary C-NOT gate between two atoms can be implemented by a sequence of five perfect π-pulses.
The alternating cycle is implemented by a sequence of k constraints propagating the edge valence change of ±1.
