Sentence examples for by differential expression analysis from inspiring English sources

The aim of this study was to elucidate the role of PARs in the pathogenesis of chronic periodontitis by differential expression analysis of PARs in the gingival tissues of chronic periodontitis patients compared with those of healthy control individuals.

Furthermore, the ligand of insulin and insulin-like receptors, IGF-2, was strongly upregulated in tumor cells, whereas there were moderate changes in transgenic cells (not detected by differential expression analysis).

It is of note that none of these 27 genes were identified by differential expression analysis.

The trimmed mean of M-values normalization method [ 48] was applied, followed by differential expression analysis using Limma voom.

We first identify a set of tumor suppressors and oncogenes by differential expression analysis between the cancer and control groups.

ECs-specific gene co-expression networks were constructed by differential expression analysis and weighted gene co-expression network analysis (WGCNA).

Both control genes were found to be stably expressed between strains by DESeq2 differential expression analysis (B2m, P=0.286; Gapdh, P=0.972).

Then, genes that were differentially expressed between the two phenotypic groups were identified by standard differential expression analysis.

However, these dysregulation events are actually difficult to be discovered by traditional differential expression analysis (DEA), while could be captured by differential coexpression analysis (DCEA) [ 22] since they tend to display as the decoupling of expression correlation.

Since we noticed that genes were often detected in only one progression state by statistical differential expression analysis while fold changes indicated a difference to the normal condition in both states, we constructed so-called extended gene sets to reduce the effect of false negative findings in the statistical analysis step.

T-test statistical analysis was carried out by using Differential expression analysis module on Genepattern (Reich et al., 2006).