Sentence examples for by cutting the dendrogram from inspiring English sources

Then the community structure is acquired by cutting the dendrogram at the levels corresponding to the maximum modularity.

By cutting the dendrogram in Figure 5 at various linkage costs we are able to extract clusters of the desired granularity.

A total of 28 clusters were produced by cutting the dendrogram at height 0.75.

Based on these distances, proteins were clustered using hierarchical clustering with complete linkage, and divided into clusters by cutting the dendrogram tree at distance 0,1.

Unsupervised hierarchical clustering with complete linkage was performed using Spearman's correlation as similarity measure, identifying three luminal A groups by cutting the dendrogram at height 0.39, which was decided as a threshold that gave convincing separation between groups.

Modules are formed by grouping genes with identical discretized expression patterns, i.e. by performing a hierarchical clustering on the discretized data with Hamming distance as dissimilarity measure and then forming clusters by cutting the dendrogram at a distance of zero (linkage is irrelevant).

By cutting the clustering dendrogram at height 60, we obtained four well defined clusters.

For 11485 genes, we selected the probes by cutting the clustering dendrogram near its bottom (h_final< = 0.4, see the definition of h_final in Materials and Methods).

This distance matrix was then used for hierarchical clustering (complete method), with clones being defined by cutting the resultant dendrogram at a distance of 0.25.

We characterised correlated gene modules by cutting the cluster dendrogram at branch lengths ranging from log10 0.05) to log10 3000) giving 39 equal intervals across the log scale.

Subsequent to HCA analysis of a spectral hypercube, pseudo-colour images of between 2 and 15 clusters, which describe different clustering structures, were assembled by cutting the calculated dendrogram at different levels.