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Meanwhile, 18 differentially expressed miRNAs were identified by comparing their expression abundances in the two libraries.
Subsequently, we identified 2,804 differentially expressed triplets (with at least one homeolog gene differentially expressed) out of 4,565 by comparing their expression levels between stress and normal conditions (fold change ≥ 2, FDR adjusted p < 0.01).
Differentially expressed contigs were identified by comparing their expression in leaves of the resistant genotype BGE015746, control vs. inoculated, and of the susceptible BGE024709, control vs. inoculated, using DEGseq [ 86].
Similarly, 1444 differentially expressed genes (DEGs) were detected by comparing their expression in OLK patients with or without oral cancer consequence with the help of student's t-test (P-value cutoff of 0.01).
The regulation of these genes by σF was further confirmed by comparing their expression in the wild-type and fliA backgrounds.
The dependence of the new blood and vascular specific genes on etsrp was then examined by comparing their expression in etsrp morphants to uninjected control embryos (Figure 5).
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By comparing their expressions between superior and inferior spikelets, we found miR164 and miR167 were higher expressed in superior spikelets at all grain filling stages except 35 DAF.
The higher Esr1 signal makes it challenging to accurately quantify any potential changes in expression levels of ER-related mature luminal genes upon Runx1 disruption, by simply comparing their expression in double to single mutants or to WT controls (as the matched MEC subsets based on FACS sorting may have different cell compositions, if Runx1-null ER+ luminal MECs become over-populated).
Microarray data were validated by qRT-PCR on 11 differentially expressed genes with different functions and by comparing their average expression ratios (DS/controls) with those of the array (Additional file 3).
The expression of the 34 genes encoding proteins potentially involved in uterine ion transfer were quantitatively evaluated by comparing their gene expression in the uterus to those of two other tissues (magnum, duodenum) where Ca2+ and HCO3- trans-epithelial transport are at low and high levels, respectively.
However, by comparing their overlapping expression pattern with that of Tbr2, we propose that some Ngn2+ cells co-express NeuroD1, and that they appear at the onset of NeuroD1 expression and downregulation of Ngn2.
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by analyzing their expression
by comparing their expressions
by increasing their expression
by inhibiting their expression
by comparing their Rf
by comparing their performance
by comparing their retention
by comparing their energy
by comparing their prediction
by comparing their influence
by comparing their correlation
by comparing their acculturation
by comparing their mass
by comparing their model
by altering their expression
by upregulating their expression
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