Sentence examples for by comparing sequences of from inspiring English sources

Taxonomies were assigned by comparing sequences of contigs and singletons to the entire NCBI nucleic acid and protein databases.

It works by the logic that, if groups B and C have more similarities to each other than either has to group A, then B and C are more closely related to each other than either is to A. Characters that are compared may be anatomical, such as the presence of a notochord, or molecular, by comparing sequences of DNA or proteins.

Two non-reference alleles of Myo15 were identified by comparing sequences of the mutated rat strain LEW/Ztm-ci2 and its co-isogenic background strain LEW/Ztm.

The minimum interspecific distances were calculated by comparing sequences of the species of interest to sequences of all remaining species in the dataset.

PCR products were cloned into EcoRV digested pBluescript and sequence integrity confirmed by comparing sequences of four individual clones from separate PCR reactions with the sequence for Brown Norway rat (Ensembl, ENSRNOG00000031367).

The diversity of Pseudomonas species present between the two patient groups was analysed by comparing sequences of the 617 bp P16S PCR products from 13 CD and 12 non-IBD patients.

By comparing sequencing of the transcriptome (RNA-seq) with the genome, the authors were able to identify alterations in two transcripts (COG3 and SRP9) that result in variant protein sequences not encoded by the genomic tumour DNA, suggesting that these variants were caused by RNA editing.

Leishmania species were identified by comparing sequences with those of the reference strains L. infantum MHOM/FR/78/LEM75, L. killicki MHOM/TN/80/LEM163, and L. major MHOM/MA/81/LEM265 (7 ).

Cancer studies focus on the identification of somatic mutations by comparing sequencing results of tumor/normal pairs from one subject.

Based on an assumption that sequence similarity is correlated to sequence relatedness, AlienG detects candidates of acquired genes by comparing sequence similarities of the query to distantly related organisms versus those to close relatives.

Bioinformatics analysis revealed transitions/transversions by comparing sequence data of SFPs to the melon EST database http://www.icugi.org.