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In mammals it has been possible to reveal these proposed selective pressures by comparing expression patterns of expressed retropseudogenes and functional retrogenes [ 8] and revealing the biases for the functional ones.
Here we describe the application of this method to determine variation of gene expression in individual human liver samples and the identification of tissue-specific genes by comparing expression patterns across several human organs.
Because acinar cells comprise ∼90% of the pancreas, differences in gene expression between pancreatic duct and acinar cells were determined by comparing expression patterns of normal isolated pancreatic ducts with that of the normal whole pancreas derived from organ donors.
This reconstruction of the ancestral state should be reinforced by comparing expression patterns of their orthologs of nonvertebrate deuterostomes with those of protostomes.
T. urticae genes coding for actin, ubiquitin and RP49 were used as housekeeping genes after being tested for their suitability as reference genes by comparing expression patterns between diapausing and non-diapausing forms (Additional file 1).
In the present study we determined changes in the expression of TRAIL and TRAIL-R during OSCC development and progression by comparing expression patterns in normal oral mucosa (NOM), oral premalignancies (OPM), primary OSCC and metastatic OSCC.
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chinensis) as suitable tool to elicit very high concentrations of 1-methoxy-indol-3-ylmethyl GS by application of methyl jasmonate (MeJA) [ 28] the identification of genes involved in this process was possible by comparing expression pattern in pak choi using the 2 × 104 K format Brassica Array with publicly available gene expression data from the Arabidopsis AtGenExpress effort [ 29].
Here we compare expression patterns of metabolic genes across 22 diverse types of human tumors.
ADGE microarray was used to compare expression patterns for the TLK286 resistant cell line and its wild type counterpart by screening the expression pattern of 20,000 genes.
Our goal was to identify novel gene pathways that have altered expression by comparing the expression patterns between the tumor and adjacent normal samples.
These findings led us to attempt to identify which of the Cor/Lea genes are controlled by which Cbfs by comparing the expression patterns of the Cbfs with the Cor/Lea expression patterns.
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by comparing microRNA patterns
by comparing expression ratios
by comparing splicing patterns
by comparing distribution patterns
by comparing vintage patterns
by comparing expression values
by comparing expression differences
by comparing expression signatures
by defining expression patterns
by comparing turnover patterns
by comparing banding patterns
by comparing methylation patterns
by comparing depletion patterns
by validating expression patterns
by comparing fragmentation patterns
by comparing expression profiles
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