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Gene expression changes upon MAP1 overexpression were obtained by comparative microarray analysis of Cy3 labeled cDNAs derived from cells expressing the empty vector (pBG1805) and of Cy5 labeled cDNAs from MAP1 (pBG1805-Map1) expressing cells.
The expression of this set of genes in resistant and susceptible genotypes of the progeny population was then assessed by comparative microarray analysis.
The first insights into the intracellular life of M. tuberculosis provided by comparative microarray analysis, revealed a switch from aerobic to anaerobic respiration, induction of the dormancy regulon dosR and iron scavenging as well as upregulation of β-oxidation of fatty acids upon infection [ 5].
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In this work, we studied the effects of LhrA on global gene expression in L. monocytogenes EGD-e by a comparative microarray analysis of wild type and ΔlhrA mutant strains.
To identify the molecular changes that are regulated by HOTAIR, comparative microarray analysis was performed on RNA isolated from KYSE180 ESCC cells with and without stable HOTAIR repression.
Over expression of transcripts encoding transmembrane proteins KCNMB4, a neural-specific β subunit of a large-conductance, calcium-sensitive potassium channel associated with glioma cell growth [ 38], and LPHN2, a putative G-protein coupled receptor, were both identified by the comparative microarray analysis.
In this study we sought to identify differentially expressed genes related to the semigamy genotype by implementing a comparative microarray analysis of anthers and ovules between a non-semigametic Pima S-1 cotton and its doubled haploid natural isogenic mutant semigametic 57-4.
In a comparative microarray analysis, we were struck by the predominance of upregulated proneural genes in both cell lines expressing SYT-SSX2 [ 26].
To further analyze these cell lines, we performed a comparative microarray analysis.
Comparative microarray analysis was performed according to MIAME guidelines [ 74].
Additional over expressed transcripts identified by comparative global microarray analysis using in vitro differentiated trisomic BG01V APCs include those encoding signaling molecules such as the protein phosphatase, PPP2R2B, the purinergic receptor, P2RY5, the ras homolog, RHOU, and others not previously associated with astrocytomas or astrocytic cancer stem cells.
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