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However, we found conserved orthologues of all three known mammalian lncRNAs— HOTAIRM1 HOXandAS and HOTAIR (sequences provided in Additional file 8)—by comparative genomic analysis and RT-PCR amplification.
Operons containing highly functionally related genes are, as revealed by comparative genomic analysis of bacterial genomes, more likely to be conserved across species [15], [16].
The presence of this cluster in other genomes was therefore investigated by comparative genomic analysis.
The Cp0710 genome was annotated and characterized by comparative genomic analysis.
By comparative genomic analysis of the OBP families in 12 Drosophila genomes, Vieira et al. identified 595 OBP genes and found that purifying selection governs the evolution of the OBP family [ 31].
We took advantage of the fact that ORFs in these genomes that have orthologs in S. cerevisiae were identified by comparative genomic analysis, assuming these ORFs to be true [14], [15].
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These blocks were defined by a comparative genomic analysis among the genomes of many Brassicaceae species, such as B. napus, Arabidopsis thaliana, A. lyrata and Capsella rubella.
Conserved genomic elements are shared by a wide spectrum of organisms, and with the increased availability of sequenced genomes, it is now feasible to identify these elements by implementing comparative genomic analysis with highly divergent species.
The study aims to decipher the putative genetic components of the fungus involved in nematode pathogenesis by performing comparative genomic analysis with nine closely related fungal species in Hypocreales.
The proposed hypothesis, linking genome size constraint and gene duplication-divergence dynamics to widespread horizontal transfers in free-living prokaryotes, is broadly supported by the comparative genomic analysis highlighted above.
The siderophore biosynthesis gene clusters were further investigated by means of comparative genomic analysis of 10 sequenced Acinetobacter isolates.
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by comparative molecular analysis
by comparative genomic analyses
by routine genomic analysis
by comparative transcriptomic analysis
by extensive genomic analysis
by integrative genomic analysis
by other genomic analysis
by full genomic analysis
by functional genomic analysis
by comparative genomic Hybridization
by comparative genomic hybridization
by comparative proteomic analysis
by complete genomic analysis
by comparative genomic hybridisation
by comparative genomics analysis
by comparative gene analysis
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