Sentence examples for by codon position and from inspiring English sources

The protein coding locus 192fin was partitioned by codon position, and separate models were chosen for each position.

We partitioned the data by codon position and performed two independent runs with five chains per run, sampling trees every 100 generations for 2 million generations.

COI and H3 were partitioned by codon position, and parameters were estimated separately for each position.

Data were partitioned by codon position and gamma distribution of rate variation with a proportion of invariable sites was used.

We partitioned our single-gene datasets by codon position and our combined dataset by gene sequences in all analyses.

For each gene, the sequences were partitioned by codon position, and substitution parameters were estimated separately for each position.

Data partitioning affected protein coding gene fragments (partitioning by codon positions) and concatenated datasets (partitioning by gene and by codon positions).

Statistical tests using ANOVA demonstrated that differences in GC content by codon positions and functional groups are significant at p < 0.01.

Because saturation of base substitution was suspected in the Cyt b data, we partitioned the data by codon positions and plotted transitions against transversions to detect potential saturation [ 38] using PAUP* version 4.0b10 [ 39].

We determined the sequence evolution model for the complete ND2 gene as well as data partitioned by codon position (1st and 2nd codon positions and 3rd codon position).

Data were partitioned by gene (CO1, 28S, EF-1α) and by codon position (CO1 and EF-1α) using the same models selected for each partition as in MrBayes analyses, and run twice (to assess convergence) for 30 million generations with 50% burnin.