Sentence examples for by both transcriptome analysis from inspiring English sources
Among the 15 transcripts investigated, 10 confirmed the direction of expression change detected by both transcriptome analysis techniques (with higher significance for mRNA-Seq data).
We further focused on a gene EfmE1162_1186 (gspA) which is predicted to encode a general stress protein A. This gene was identified by both transcriptome analysis (4.6 and 47.0 fold up-regulated at 5 min and 15 min of bile salts treatment, respectively) and M-TraM (2.8 fold less signal in bile-exposed library compared to the control).
Other genes identified by both the transcriptome analysis and the computational promoter prediction include those encoding flagella biosynthesis, formate dehydrogenase, alcohol dehydrogenase, and acetyl-CoA carboxylase (Table 2 and Additional file 5).
Interestingly, we observe both by transcriptome analysis and qRT-PCR that PPIA gene expression is clearly down-regulated during PrV infection.
Although drought is seen as a diversifying factor in population dynamics [ 30] we show that in contrast to previous studies [ 41] and in accordance to others [ 42, 43], a substantial variation exist within diverged populations in drought response, supported by both phenotypic and transcriptome analysis.
In the study, grass carp, an important farmed fish in China, were subjected to a compensatory growth experiment followed by transcriptome analysis by RNA-sequencing.
The combined data also show that Blimp1−/− rESCs are similar to control rESCs by transcriptome analysis as they both contribute to adult chimeras, except that the mutant cells cannot undergo specification into PGCs and be transmitted through the germline; they may also not contribute to some somatic tissues where Blimp1 is required later in development as shown previously (Robertson et al., 2007).
Expression of Atlantic salmon class II genes was estimated by transcriptome analysis and by gene-specific RT-PCR analysis.
The components of miRNAs regulatory network at the transcriptional and the protein level have been also revealed by whole transcriptome analysis and Tandem Mass Tag in transfected GBM cells.
