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Branch support was assessed by bootstrap analysis based on 1000 replicates.
Confidence estimates were determined by bootstrap analysis based on 1000 replicates.
Statistical significance of branches was tested by bootstrap analysis based on 1000 iterations.
Confidence intervals for NJ trees were obtained by bootstrap analysis based on 2,000 replicates.
Maximum likelihood trees were generated with PhyML [ 40] with tree node support evaluated by bootstrap analysis based on 1000 pseudoreplicate datasets.
The reliability and goodness of fit of the dendrogram obtained was tested by bootstrap analysis based on 1,000 permutations, followed by the program Consense module in the software package Phylip.
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These findings were confirmed by the results of bootstrap analysis based on 100 bootstrap samples.
A bootstrap analysis based on 150 bootstrap replicates was performed to assess robustness of individual clades.
A bootstrap analysis based on 1000 replicates was performed.
The overall model uncertainty is investigated in a bootstrap analysis based on the model simulation results, with a 95% confidence interval calculated by the percentile method [ 24].
Bootstrap analysis, based on 1,000 replicates, was performed on the global THAP sequence alignment.
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