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By applying a smooth kernel density estimator over 10,000 independent realization of h(t), a bimodal PDF was obtained (see Figure 1b).
Conformational sampling in Rosetta was constrained by applying a smooth pseudo-energy potential between each pair of residues in the list that favored conformations with the residues between 0 and 30 Å apart and disfavored conformations with the residues more than 30 Å apart.
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It is well known that image noise can be repressed by applying a smoothing filter on the entire image.
For the present simulations, relatively coarser topographic data were used by applying a smoother for the NICAM simulations.
The algorithm NESTA was developed by applying a smoothing technique for the nonsmooth ℓ 1-norm and an accelerated first-order scheme, both from Nesterov's work [19].
On the other hand, SEMD itself provides an alternative to the boundary problem treatment, that is, without using any periodic/symmetric condition or characteristic wave, SEMD can alleviate the boundary problem by applying a smoothing procedure to all levels.
However, as we will show in Section 2.4, by applying a smoothing operation to both the population distribution estimate and the sample eigenvalue distribution estimate, the relation between the two smoothed distributions is still accurately described by the Marčenko Pastur relation.
By applying a smooth-then-constrain-approach as proposed by [ 21], the reciprocal nature of contacts was taken into account.
Density plots of Ks distributions were plotted by applying a smoothing bandwidth of 0.05.
Since gains and losses identified by our experimental CGH reflected the resolution in cytobands, we determined as well the gains and losses on cytoband resolution for vCGH by applying a smoothing method.
To compare vCGH with experimental CGH on the same resolution, we also determined the gains and losses on cytobands by applying a smoothing algorithm in vCGH as described in Method section.
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CEO of Professional Science Editing for Scientists @ prosciediting.com