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Hence, the estimate of Theorem 2 is sharp in the following sense: the sequence q n in Theorem 2 cannot be replaced by any other sequence decreasing to zero more rapidly as n → ∞.
Hence, the estimate (Equation 14) is sharp in the sense that the sequence q n in Equation 14 cannot be replaced by any other sequence decreasing to zero more rapidly as n → ∞ Open image in new window.
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However, the peptide of CDS shares little similarity with any other sequence database entries by Blast searches.
These clades of multiply-aligned sequences, including each "degenerate clade" of one sequence that cannot be reliably aligned with any other sequence, are used by PhyloScan.
In addition, the in silico trypsinization of the databases performed by Mascot could not identify any other sequence-combinations that could fit with the observed spectra, when such a small mass error as 10 ppm was required on the database search (data not shown).
We can divide the sequence into two sequences: one satisfies, which is denoted by and the other sequence satisfies, which is denoted by.
Submitted nucleic acid sequences or protein sequences in FASTA format are computed for the output alignment in PHYLIP format using ClustalW; a query initiated in a pre-aligned file in PHYLIP format by other sequence align tools disregards this procedure.
To investigate this inconsistency between the predicted and observed tendencies, we examined the possibility that the relationship between LD and conserved regions is distorted by other sequence features, such as physical distance, genic content, GC/CpG frequency, or chromosomal location.
Phylogeny of Clade 3 continues with katE genes found in multicellular metazoan genomes (lower part of Fig. 4) following the general animal evolution line as reconstructed by other sequence markers [21].
When compared with case-patients infected by other sequence types of C. jejuni, persons infected with ST-45 are more likely to live in rural areas, to be <5 years of age, to have gone fishing before illness, or to have consumed home-delivered milk, and were much less likely to have eaten any chicken in the 2 weeks before illness.
Our phylogenetic analysis revealed that the 17 human Hsp70s characterized in this work belong to seven major Groups, confirmed by other sequence features, such as "signature sequences" (sequence elements present in one Group but not in others) and exon-intron gene structure, and correlated with other data (e.g., molecular mass and locale of residence).
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