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Connections with bilinear modulation show changes in coupling induced by an experimental factor.
Second, DCM can measure how each connection is modulated by an experimental factor (i.e., context-dependent connectivity).
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The soil organic carbon contents were transformed into organic matter contents by multiplying by 1.724, which is an experimental factor, as reported by Hesse (1972).
To assign Functional Associations by Response Overlap (FARO) between an experimental factor and the factors assessed in a compendium of gene expression responses, a query response of differentially expressed genes from one study was compared to the responses of the compendium (Figure 1).
We thus expect that this approach included a sufficient number of SROIs within the spectra, which are not influenced by any experimental factors, to build a predictive model.
Principles component analysis focusing on the GeneChip control probes only demonstrates the lack of distinct populations of GeneChips caused by any experimental factors (Figure 8 B), providing evidence for the positive impact of the controlled reduction of variation introduced by technical parameters.
On the other hand, if the processes are non-modular and open or penetrable to extraneous information, they might be affected by a common experimental factor.
We predicted survival to anthesis from each of three continuous census one traits (early season height, early season leaf length, and emergence date) while accounting for variation introduced by all experimental factors mentioned in the anova model above.
Variation explained by each experimental factor based on PERMANOVA (b).
This approach increased the power of the analysis, since some of the genotype random variability was explained by the experimental factor, making it easier to find significant differences.
The results of the study demonstrated that that very few genes had their expression profiles affected by more than one experimental factor.
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