Sentence examples for by alignment of sequence from inspiring English sources
This transition is represented in the alignment of Figure 2. All these substitutions were silent as shown by alignment of sequence R in BLASTX (NCBI; not shown).
It is noteworthy, that all the nucleotide differences observed between this new strain and the reference strains of genotype1 in nucleotide BLAST were synonymous as shown by alignment of sequence R in BLASTX.
The apicoplast genome sequence (type I strain RH) was from GenBank (acc# NC001799) and the mitochondrial genome sequence was inferred by alignment of sequence fragments (D. Shanmugam and L. Peixoto, unpublished data).
Phylogenetic analysis was performed by alignment of sequences using Clustal W [ 75] and neighbor-joining trees were generated with 1 000 bootstraps.
We have confidence in the KoRV sequences reported here since i) in some cases the sequences match exactly with previously published data; and ii) the assembly is supported by alignments of sequence reads back to the transcripts (analysis not shown).
The L er-0 allele was subjected to dideoxy sequencing by the ABI-Sanger instrument followed by alignment of the sequence trace to the iteratively resolved indel for validation purposes.
Swelfe identifies repeats by alignment of DNA sequences, amino acids sequences and three dimensional (3D) structures.
We overlaid these combined 129 genomic regions onto the genome-scale phylogeny, determined by alignment of orthologous sequence of the core genome.
The specific sequences were selected by alignment of all sequences available for each virus from the National Center for Biotechnology Information (NCBI) GenBank Database.
Functional characterization is usually performed by alignment of the sequences to already annotated proteins to find their homologous sequences [ 62, 117 119].
