Sentence examples for by a score function from inspiring English sources

VERIFY3D program assessed the packing quality of each residue of the model where the compatibility of the model residues with their environment is assessed by a score function.

Then, target proteins are ranked according to the binding scores estimated by a scoring function.

Each candidate transformation is further evaluated by a scoring function that considers both geometric fit and atomic desolvation energy.

The docking quality is typically measured by a scoring function: a mathematical predictive model that produces a score representing the binding free energy and hence the stability of the resulting complex molecule.

The result is a list of compounds ranked by a scoring function that estimates the activity on the target (binding affinity, equilibrium constant, binding energy), which will be confirmed experimentally.

The strength of each alignment is determined by a scoring function consisting of a sum of all residue-residue contacts.

In addition to a list of genes, we desired a system that provided diverse functional annotations, as these gene characteristics constituted the variables that could be evaluated and quantitated by a scoring function.

The alignment accuracy is determined by a scoring function used to drive sequence-template alignment.

Third, the matches are evaluated by a scoring function, and a match is reported only if its score is higher than a specified threshold.

First, the genome was scanned by a scoring function, which assigned a score ϕ(S i ) to each base of the chromosome.

Finally, the proteins in database are ranked by a scoring function that evaluates the overall similarity based on the fragment matches.