Sentence examples for by a quality score from inspiring English sources

Across the 51 FXS-like patients sequenced by array hybridization, 99.6% of bases were called with high reliability, as determined by a quality score of 30 or greater.

In such cases, weighting each dataset's contribution by a quality score, effect size, or variance on the test statistic might be desirable and can be accomplished by employing more complex methods that accommodate such weights.

We did not weigh each study by a quality score, because no such score has received general agreement for use in a meta-analysis, especially of observational studies, making more difficult the evaluation of its usefulness (Altman, 2001).

As the quality of read mapping may affect variant inference substantially, trimming is applied to MiSeq data: since the bad quality suffix of a read is indicated by a quality score of 2, we trim MiSeq reads by removing 3′ suffix of each read with such a quality, and retain only reads with a minimum length of 30bp.

The quality of each study was estimated by a quality scoring system which ranked studies according to the consideration of major confounders, exposure characterization, and technical parameters.

This method has already been used in other approaches adopted by researchers in developing a quality score from checklists (e.g., [16]).

We applied quality filtering by discarding reads with a quality score <40 and checking against strand bias.

Coupling the feature-based description to a quality score by means of a single function is possibly the most popular approach to VQA.

All spirograms were reviewed by the BOLD Pulmonary Function Reading Center and assigned a quality score based on acceptability and reproducibility criteria of the American Thoracic Society and European Respiratory Society guidelines [ 16].

Short indels were identified in three subsequent steps: (1) mapping the paired-end reads to the B73 reference sequence by fitting up to a 5-bp gap, (2) merging the redundant pairs prior to searching for indels, and (3) extracting of gaps that were supported by at least three non-redundant paired-end reads and had a quality score (provided by SOAPindel) higher than 19 [ 32, 63].

SNPs identified by both methods were further filtered by SNP quality and SNPs with a quality score of less than 20 were also removed to derive a final set of SNPs.