Sentence examples for by a permutation based from inspiring English sources

The significance of the correlations was determined by a permutation based algorithm [15].

The statistical significance of the enrichment score ES S m) is assessed by a permutation based p-value.

Alternately, when genes were classified as differentially expressed using a less stringent unadjusted p < 0.01 threshold, FDR was calculated by a permutation based method.

Cluster significance was determined by a permutation based test, used to quantify the expected number of genes that would be assigned to each profile if the data were generated at random.

This was accomplished by evaluating the statistical significance of clusters through a permutation based Monte Carlo hypothesis testing procedure (9999 iterations).

In order to establish accurate empiric P-values we used a permutation based, topology-corrected method.

The pfp is calculated using a permutation based procedure (100,000 permutations were conducted).

A permutation based P value of <0.05 for the C score represents significant co-occurrence.

Each point represents the percentage of data sets generated from a single SNP pair in which locus 1 (domesticus sterile allele; green), locus 2 (musculus sterile allele; purple), or both loci (orange) were identified by association mapping (≥1 SNP significant by permutation based threshold within 10 Mb of 'causal' SNP).

For each of these 47 predicted regulatory modules, we estimated the P value, or the probability of finding it by chance, using permutation based tests.

The top-ranked interaction model was chosen for a given order of interaction, and its P value of prediction accuracy (PA) was evaluated by a permutation test based on 1000 shuffles of the adjusted phenotypic values.