Sentence examples for by a microarray platform from inspiring English sources

By doing so, we create a genome-wide probability that a copy-number variation with a particular size independent of its genomic location will be detected by a microarray platform.

Data loss occurs in several ways and depends on the data configuration: (i) if proteins are not assigned to a family in a particular family approach; (ii) if transcripts encode non-protein coding genes and a protein family approach is selected; (iii) if gene sequences are not covered by a (microarray) platform; (iv) if significance criteria, as defined by the user, are not satisfied.

Here, we take advantage of the natural variation of sweet and grain sorghum to uncover genes that are conserved in rice, sorghum, and sugarcane but differently expressed in sweet versus grain sorghum by using a microarray platform and the syntenous alignment of rice and sorghum genomic regions containing these genes.

The differentially expressed miRNAs in cervical squamous cell carcinoma tissues were screened by using a microarray platform (μParaflo Sanger miRBase release 13.0).

They also complement recent efforts by others to develop a microarray platform for D. magna [ 18]; [ 19]; [ 20].

The presented results are the first ones obtained by the use of a microarray platform with an extended coverage of pine transcriptome (36.4 K cDNA elements).

We did not amplify the IP DNA during preparation of hybridization probes to avoid any amplification bias, and this was enabled by the use of a microarray platform with a high sensitivity and low signal/noise ratio.

All samples were analyzed by high-resolution SNP genotyping using a microarray platform interrogating over 1 million SNPs (the Illumina Omni1 BeadChip).

On this basis, to identify cellular genes that are modulated by HCV RNA replication, we analyzed the expression profile of cell lines carrying a full-length HCV genome by a new microarray platform developed by the Applied Biosystems.

The client application allows user to query TBrowser database using six methods: by gene symbols, by probe IDs, by experiments, by microarray platform, by ontology terms (annotation) or by TS.

Gene coverage was estimated as the percentage of Entrez Genes with a unique position in the UCSC Genome database that is tested by a given microarray platform.