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The only problem with applying this result across a range of support functions is that when their values for likelihoods differ, function Pα may disagree with Pβ on which of the hypotheses is favored by a given sequence of evidence.
The sequences are grouped by a given sequence identity threshold, which corresponds to the local sequence similarity.
We undertook a regression analysis to evaluate quantitatively how LD is influenced by a given sequence feature for each population.
Briefly, sensitivity measures the fraction of the structural alignment that is correctly recovered by a given sequence alignment, while precision measures the fraction of a sequence alignment that correctly reproduces the structural alignment.
RNAeval computes the energy of a given structure formed by a given sequence and can in particular be used to re-compute energies for a given pair of sequence and structure with different energy models.
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The problem of evaluating the relevance of a particular motif in terms of the likelihood of generating it by chance in a given sequence has been extensively faced (see for example the work by Robin and coworkers [ 38] for the probability of finding a motif composed of two 'boxes' separated by a variable distance).
A motif can be counted multiple times in a given sequence (by-NT) or a motif can only be counted zero or one time in a given sequence (by-Sequence).
Users can query the database for a given sequence by providing its accession number, EST name or gene ID.
If we denote the n suffixes of such a given sequence by s0 to s n 1, then the i th suffix s i will correspond to s i = g ig i+1… g n 1$.
The Clover score estimates the degree of over-representation of a given sequence by estimating the thermodynamic binding energy of a transcription factor to the promoter sequences of genes in a given cluster and comparing this to the binding energy of the transcription factor to a control sequence (in this study, the 2000 bp region upstream of all mouse gene promoters).
We study the extension problem of a given sequence defined by a finite order recurrence to a sequence defined by an infinite order recurrence with periodic coefficient sequence.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com