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A gene, the phosphatidic phosphatase 2 (PAP2), is not predicted by the Gaze annotation of the 12×.0 reference sequence version but it is annotated by the Gaze annotation of the 8× reference sequence version and confirmed by Fechter et al. [ 18] on the 12×.0 reference sequence version.
For example, melon unigene cHS_39-F10-M13R_c is a predicted target of miR159a but it is annotated as positive regulator of brassinosteroid signaling rather than a MYB or TCP transcription factor, which is sensitive to miR159 regulation in Arabidopsis.
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a ssrS is annotated as an rRNA in Crooks but in K-12 and W it is annotated as an ncRNA.
It is annotated in Ensembl as EphA10 precursor.
If a protein was not present in any of the above pathways but in other pathways of KEGG, it was annotated as LOW.
It's annotated with stories from my actual life... there are very few!
In total, it says it's annotated 200,000 "miles of data" collected by self-driving cars.
Older content uploaded in the past could be hidden from display until it too is annotated.
The GenBank RNA associated with this gene was altered to remove the frameshift, but it is still annotated as a pseudogene [GenBank:XR_010864.2].
For example, the protein sequence with GI 40950644 has three mutations (L35Q, G238S, and E240K), therefore, it should be named "SHV-12" according to the SHV mutation table, but it is actually annotated as "beta-lactamase SHV-5" in the NCBI protein database.
The Glyma13g04670 gene has been uncharacterized in soybean, but it has been annotated as a Cytochrome P450 with similarity to Arabidopsis CYP82C4 (Murgia et al. 2011).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com