Sentence examples for build of a reference from inspiring English sources

However, there are still relatively few reports in the ripening literature describing RNAseq, a situation that is likely to change rapidly, especially as no prior sequencing is required for a de novo build of a reference transcriptome, in the absence of an available genome sequence.

As our calculations of protein diffusion built on a reference diffusion coefficient for green fluorescent protein measured in an intracellular environment [ 38], these factors can be considered to be taken into account at least partially, while impaired diffusivity of very large protein complexes that may violate the Stokes-Einstein relation were investigated separately (Fig. 6).

To obtain a free hand line scan routine, we created a scan path on a reference image which is built of a list of scanned pixel locations on that image.

The number of animals genotyped to build a reference population was therefore reduced without reducing the accuracy of selection.

Our second approach to transcriptome assembly was designed to annotate as many full-length coding sequences (toxin and nontoxin) as possible and to build a reference database of sequences to facilitate the future analysis of other snake venom-gland transcriptomes.

Educt-product pairs of the core metabolic pathways were obtained from the Kyoto Encyclopedia of Genes and Genomes (KEGG [ 31]) Pathway database and used to build a reference graph of 907 nodes.

In order to build a reference set of tetraspanin, we set out to find all tetraspanin sequences from human, mouse, zebrafish, C. intestinalis, B. floridae and S. purpuratus.

We first assembled draft genomes to identify TE families and built a reference set of elements for annotation of assembled genomes.

Second, a multiple co-inertia analysis (MCOA) was performed, which reveals the common features of single-marker analyses, builds a reference structure and makes it possible to compare single-marker structures with this reference through graphical tools.

We built a reference dataset of environmental (non-gut) and gut associated Melainabacteria 16S rRNA gene sequences obtained from the Greengenes database (DeSantis et al., 2006) and queried the dataset at 97% ID against publicly available 16S rRNA gene datasets obtained from http://www.microbio.me/qiime.

Then, in Section 3.2, we propose a dynamic gesture recognition approach which exploits a set of LMA features that makes it possible to build a dictionary of reference poses exploited within a HMM recognition framework.