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The markers informative in our experimental population enabled us to build a genetic map 77 cM long, comprising 16 framework markers.
We describe here how the pipeline functions to build a genetic map de novo, and then how it can use a reference genome.
X indicates those cases where there were not enough markers to build a genetic map and for which marker density could therefore not be calculated.
The second approach directly used high-quality GBS markers carrying SNPs to build a genetic map (henceforth, de novo mapping approach).
Thus, it is easy to fast build a genetic map with a good coverage of the pine genome with only a relatively small amount of experimental effort.
Segregation analyses were performed on the interspecific progeny (74 individuals) derived from the back-cross [(C. canephora × C. heterocalyx) × C. canephora], which had been used to build a genetic map ([ 54] and unpublished results).
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JoinMap 3.0 builds a genetic map adding markers in three successive steps.
We have built a genetic map using a combination of anonymous dominant markers and known genes of co-dominant evaluation.
We built a genetic map with the mapping module of JOINMAP, using the Kosambi mapping function, a recombination threshold of 0.450, and a jump threshold of 5.0.
Using this strategy in Arabidopsis, Singer et al. [ 16] built a genetic map with 676 genes by SFPs detection using DNA hybridization while West et al. [ 21] used complementary RNA (cRNA) hybridization to map 968 genes based on SFP.
On the basis of genotypes of 411 marker loci in 404 F2 progeny, we built a genetic map comprising 355 markers at an average spacing of 5.5 cM, 22 linkage groups (LGs) and 1965 cM.
More suggestions(15)
constructing a genetic map
building a genetic map
build a common map
build a genetic linkage
build a genetic database
build a perfect map
build a computerised map
build a genetic network
build a nationwide map
build a genetic tobacco
build a static map
build a genetic profile
build a physical map
build a genetic model
build a unique map
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