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The small-world topology of residue networks is established, and various network properties such as the clustering coefficient, path length, and degree distribution are used to account for, e.g. the different fold-types in proteins [27], interfacial recognition sites of RNA [28], and bridging interactions along the interface of interacting proteins [17].
It is thought that CBC interacts with one or more of the U1 snRNP proteins to facilitate bridging interactions between CBC bound to the pre-mRNA mG cap and the U1 snRNP at the 5′ splice site (Lewis et al. 1996; Görnemann et al. 2005).
A few polar organic groups adsorbed via water bridging interactions.
In addition, multivalent cations can augment the effect by undergoing bridging interactions with carboxy and hydroxy groups on adjacent chains.
Specifically, oscillatory melt rheology and shear relaxation tests have been considered in order to deeply investigate the interfacial bridging interactions.
Fig. 2 features two divalent cations (Mg2+ in this case) engaged in bridging interactions with HA polymer chains, illustrating their role in the formation of internal hydrophobic domains.
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In this instance the central stalk subunit F adopts an extended conformation to engage in a bridging interaction tethering the rotor and stator components together.
The two asparagines form a bridging interaction between the active site and the substrate binding inserts.
If the same particle interacts with the membranes of two cells it can mediate attractive interaction between the erythrocytes by a bridging interaction.
Erb1 appears to dissociate from pre-ribosomes after C2 is cleaved, suggesting that this bridging interaction is required only at early stages of 60S assembly.
The presence of attractive cross-bridging interactions contributes only modestly to structure for moderate degrees of cross-bridging and leads to NF aggregation for extensive cross-bridging.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com