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To evaluate the robustness of genetic association under varying prior specifications, Bayes factors are compared as signals of positive marker association, whereas genomic estimated breeding values are considered for genomic selection.
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Consider how breeding values are calculated for the different approaches.
Simulation shows that the resulting estimated breeding values are unbiased predictors of true breeding values.
The changes in breeding values were strong if considering that they occurred in only four generations.
Deregressed estimated breeding values were available for 328 genotyped boars.
Values were considered statistically significant at P<0.05.
Values were considered not significant (n.s).s
All values were considered significant if p<0.05.
In a way, modeling of weighted deregressed expected breeding values may be considered an approach to account of heterogeneous variance, in this case the variance of the expected breeding value.
In other words, a QTL cluster that was usually able to increase the values of ELO, STR, UHM or UI but reduce the SFC value is considered as a favorable QTL from a breeding point of view.
Mean value was considered.
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