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After partitioning the breeding value of each individual, the accuracy of estimated additive effects was calculated as the correlation between the TBV due to additive effects (TBV Add ) and the GEBV due to additive effects (GEBV Add ).
The breeding value of each individual was obtained by summing across all QTL the breeding value at each QTL.
The overall breeding value of each animal was the sum of a 'residual polygenic breeding value' and a 'QTL breeding value'.
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The animal model exploits information from relatives to estimate breeding values of each related individual in the pedigree (Lynch and Walsh 1998).
This model is, thus, a multiple-trait model with two "pseudo-traits", reflecting the breeding value for the trait in breeds 1 and 2. This model resembles the MACE model [ 18] in which the breeding values of each bull in different countries are seen as different, correlated traits.
The TP rate threshold value of 11.0 GPa was somewhat arbitrary although based on the recommended tree breeding value of 11 GPa.
FM reduced the variance of the average breeding value of the mates of an individual.
The reason is that the breeding value of an individual can be considered as a combination of the breeding value of its parents and a Mendelian sampling term.
The expected mean breeding value of a potential offspring was calculated as: mBV = MGBV s + MGBV d, where mBV is the expected breeding value of an offspring based on the parental average estimated breeding values, MGBVs is the estimated mean gamete breeding value of the sire, and MGBVd is the estimated mean gamete breeding value of the dam.
Each method used phenotypes from the reference populations to estimate the breeding value of individuals in the test set.
Most significant uses are estimation of breeding value of genotypes and marker-assisted selection studies (4).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com