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The differences in the response variables between spruce logs with tops and branches retained and 4-m spruce logs without tops and branches were assessed using all spruce logs from the 37 experimental blocks containing branched logs (37 branched and 215 branchless logs; only forested sites, not clear-cuts).
Phylogenetic trees were reconstructed using the neighbor-joining method [ 65] and the statistical reliabilities of the internal branches were assessed using 1,000 bootstrap replicates.
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Statistical support for branches was assessed using 1000 bootstrap datasets.
Bootstrap support for individual branches was assessed using 1000 replicates.
Penalized likelihood (PL) allows variation in rates along branches was assessed using r8s version 1.7 [ 89].
The reliability of internal branches was assessed using the posterior probabilities (PP) calculated with MrBayes.
The reliability of internal branches was assessed using the bootstrapping method (400 bootstrap replicates).
Reliability of internal branches was assessed using the aLRT test (SH-Like) [ 46].
Reliability for internal branches was assessed using the aLRT test (SH-Like).
Reliability of internal branches was assessed using the bootstrapping method (1 000 bootstrap replicates) and the approximate likelihood ratio test (aLRT – SH-Like) implemented in MEGA and PhyML, respectively [ 52, 53].
Reliability for internal branch was assessed using the aLRT test [50].
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