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We also run the program codeml in two-value branch mode (runmode = 0, mode = 0; all mammals for one ratio value and all fishes for another ratio value) to calculate the average dN/dS ratio in each group from different species.
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Relationship between the second branch modes and so-called "thickness-shear mode" is discussed.
Generalized boundary co-ordinates are defined from branch modes obtained by introducing mass loading along the boundary.
The primary branch modes are good approximations, in terms of both structure and frequency, to corresponding modes of the continuous governing equations, and offer some improvements over a quadrilateral C-grid scheme.
Laser scanning confocal examination of wild-type lungs revealed Celsr1 and Vangl2 expression in all three branch modes (Fig. 4B, E, F and H).
This occurs via regulation of the branching mode of the morphogenetic sequence or epigenetic landscape.
The ordinal classification of pleurocarpous mosses rests on characters such as branching mode and architecture of the peristome teeth that line the mouth of the capsule.
Lim et al. (2001) reported two morphological variants of G. salicornia from different localities in Malaysia based on the branching mode and presence of constriction on the thallus; variant A was constricted throughout, and grew on the roots of mangrove trees; variant B were not constricted throughout the plant, and formed mats on rocks, coral, or mud.
Fig. 2 presents an example of the FGF10 localization that would correspond to the lateral branching mode on a growing lung bud.
The domain branching mode remains stable as long as standard deviations of the random variables θ do not exceed 0.2 0.3 of the reference value (Menshykau et al., 2012).
The TEDG of CLL shows a clear pattern of the flow of alterations, revealing that genetic alterations of CLL are sequentially ordered in a branching mode.
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