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This image was spatially normalized to the Montreal Neurological Institute 305 (MNI305) brain template using a 12-parameter affine normalization and 16 nonlinear iterations with 7×9×7 basis functions [32].
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For visualization of ROI-masks and the results of ROI-based MVPA and searchlight MVPA, cluster images were superimposed on a standard brain template using MRIcron software (http://people.cas.sc.edu/rorden/mricron/index.html).html
Locations of these selected voxels (henceforth, diagnostic voxels) were visualized on a standard brain template using MRIcro [12].
Functional images were registered to high-resolution structural scans using FLIRT (Jenkinson and Smith, 2001), and a standard MNI brain template using FLIRT and FNIRT (Andersson et al., 2007).
Functional images were co-registered and normalized to the standard MNI EPI template (Montreal Neurological Institute brain template), using 12-parameter affine normalization.
Distinct differences in distribution of brain activation patterns are highly likely to exist because of different reconstruction algorithms, co-registration methods, and the anatomical brain template used between the two methodologies.
The gray matter decreases in ADHD are displayed on brain templates using the Mricron software program [ 21].
For the internal tests, the MRI images making up the Chinese and U.S. (MCBI; Sanchez et al., 2012a) templates were registered into those four types of brain templates using the linear (12-dof Affine) transformation.
In the last step, the skull-free brain was normalized to the custom template using a combination of linear and non-linear transformation [95] in SPM2.
The current study was designed to create Chinese age-specific MRI brain templates used for scientific research with Chinese pediatric populations.
The anatomical image was co-registered to the mean functional image using the mutual information criteria method and segmented and normalized to the International Consortium for Brain Mapping template using linear and non-linear deformations [30], [31].
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