Sentence examples for bp in the coding from inspiring English sources

CYP6M7 is highly polymorphic, with 1 SNP every 15 bp in the coding regions and 1 SNP every 9 bp when non-coding regions are included.

It contains a long deletion (306 bp) and inversion (677 bp) in the coding region of the gene.

The exception was FAD2-2A, for which expression was not detected; FAD2-2A was predicted to be nonfunctional as it has a deletion of 100 bp in the coding region [ 5].

We profiled genome-wide gene expression using a 3′-biased RNA sequencing method, 3SEQ (Beck et al., 2010), in order to maximize SNP coverage in the 3′ UTRs, where the average SNP density is ∼1 SNP per 170 bp (compared to 1 SNP per 265 bp in the coding sequence).

This is because of the much smaller number of the synonymous nucleotide sites (137~138 bp) in the coding region than in the total length of the introns (3.0~3.3 kb) and the lower level of synonymous nucleotide diversity (0~0.4%) than the synonymous divergence between the L and M opsin genes (6.1~6.4%).

This trend is not correlated with the size of coding regions (i.e., it is unlikely that the trend is a function of increasing number of unconstrained sites, with 888, 849, 1,014, and 777 bp in the coding regions of HoxA13, HoxA11, HoxA10, and HoxA9 paralogs, respectively).

The 178 accessions were also genotyped with two other primer pairs, the first one to detect an 8 bp deletion and the second one to detect a 3 bp insertion in the coding sequence of the BADH2 gene.

The position of the ATG is indicated with 0; negative numbers are referred to bp positions in the putative regulatory regions while positive numbers indicate bp positions in the coding region.

Sequence analysis led to the discovery of a 21 bp deletion in the coding region unique for the paternal E-allele within the region of the oligo design.

One of these is a variable number 48 base pair tandem repeat (48 bp VNTR) in the coding region of the gene [ 89].

Specifically, indels are scarcer and shorter in coding sequences [ 19] where selective constraints are the most intensive, and 3 bp indels in the coding regions, which maintain the coding sequence without frameshifts, are by far the most common class [ 22].